My software notes

April 20, 2011

Cube view of 3D NMR data

Filed under: NMRPipe and NMRview,softwares and scripts — kpwu @ 5:18 pm
Tags: , ,

Last week, I posted a blog article that we can make a cube of 3D NMR data but that scripts (at that time) can not draw the labels/axis values. I read the NMRPipe discussion forum today and realized on March 20, the author of NMRPipe has a modified version of nmrCube.tcl and is included in the new version of NMRPipe.

This new nmrCube.tcl now can draw labels as well as the tics/values of each dimension. Here is the example I use my HNCO data to show.

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3 Comments »

  1. […] New post is available to show to changes. […]

    Pingback by [NMRPipe]–making a 3D cube « My software notes — April 20, 2011 @ 5:21 pm | Reply

  2. ./nmrCube.tcl
    dyld: Library not loaded: /usr/local/nmr/lib/libtk8.4.dylib
    Referenced from: /Applications/NMRPipeX/nmrbin.mac/nmrWish
    Reason: image not found
    Trace/BPT trap

    How to troubleshoot this?

    Comment by gery — September 25, 2015 @ 7:29 am | Reply

  3. If you’re on a mac, install the newest version of Xquartz. X11 used to be in “/usr/X11”, but in the newest updates, it was installed in /opt/X11. Just make a new symlink to /opt/X11. That should work.

    Comment by MLT — November 3, 2015 @ 6:58 am | Reply


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