[IDP] human high mobility group protein HMGA1

• Title:  NMR resonance assignments of the human high mobility group protein HMGA1
• Journal: Journal of Biomolecular NMR
• DOI:10.1007/s10858-006-9116-8
• Author: Garry W. Buchko, Shuisong Ni, Natacha M. Lourette, Raymond Reeves and Michael A. Kennedy
• number of AA:107
• Sequence:
  MSESSSKSSQPLASKQEKDGTEKRGRGRPRKQPPVSPGTALVGSQKEPSEVPTPKRPRGR
  PKGSKNKGAAKTRKTTTTPGRKPRGRPKKLEKEEEEGISQESSEEEQ
• BMRB code: 7279

HSQC:

[IDP] murine amelogenin

• Title:  ¹H, ¹³C, and ¹⁵N resonance assignments of murine amelogenin, an enamel biomineralization protein
• Journal:  Biomolecular NMR Assignments Online first
• DOI:10.1007/s12104-008-9092-x
• Author: Garry W. Buchko, Jacky Bekhazi, John R. Cort, Nancy B. Valentine, Malcolm L. Snead and Wendy J. Shaw
• number of AA:180 + 12 N-terminal His tag
• Sequence:
  MRGSHHHHHHGSPLPPHPGSPGYINLSYEVLTPLKWYQSMIRQPYPSYGYEP
  MGGWLHHQIIPVLSQQHPPSHTLQPHHHLPVVPAQQPVAPQQPMMPVPGH
  HSMTPTQHHQPNIPPSAQQPFQQPFQPQAIPPQSHQPMQPQSPLHPMQPLA
  PQPPLPPLFSMQPLSPILPELPLEAWPATDKTKREEVD
• BMRB code: 15662

HSQC and Calpha/Cbeta CSD plots

[IDP] mouse and human alpha-synuclein at 263K

• Title: Characterization of Conformational and Dynamic Properties of Natively Unfolded Human and Mouse alpha-Synuclein Ensembles by NMR: Implication for Aggregation
• Journal: J Mol Biol. 2008 May 16;378(5):1104-15.
• DOI:10.1016/j.jmb.2008.03.017
• Author: Kuen-Phon Wu, Seho Kim and David A. Fela and Jean Baum
• number of AA:140 (human), 140 (mouse)
• Sequence
  • human
    MDVFMKGLSK AKEGVVAAAE KTKQGVAEAA GKTKEGVLYV
    GSKTKEGVVH GVATVAEKTK EQVTNVGGAV VTGVTAVAQK
    TVEGAGSIAA ATGFVKKDQL GKNEEGAPQE GILEDMPVDP
    DNEAYEMPSE EGYQDYEPEA
  • mouse
    MDVFMKGLSK AKEGVVAAAE KTKQGVAEAA GKTKEGVLYV
    GSKTKEGVVH GVTTVAEKTK EQVTNVGGAV VTGVTAVAQK
    TVEGAGNIAA ATGFVKKDQM GKGEEGYPQE GILEDMPVDP
    GSEAYEMPSE EGYQDYEPEA

HSQC spectra at 263K (left: human, right: mouse)

Cara 1.8.4.2 starts to support Mac OS X aqua

I didn’t notice the news (Cara has Mac OSX aqua version) until I helped a friend install Cara on his new macbook pro (leopard).

From Cara’s release news page, the last update date was 2007/4/26 (one year ago) which doesn’t show any information of supporting the native Mac OS X user interface. But I found there is an Alpha version using Mac OS X aqua interface listing in the Cara Download center.  It may not stable enough to be a daily-use NMR data analysis program, however, it’s a good news for Mac users that we don’t need to open X-window first.

2008/5/3