My software notes

March 4, 2008

[IDP] HIV-1 TAT

Filed under: IDP — kpwu @ 1:02 pm
  • Title: HIV-1 Tat is a natively unfolded protein: the solution conformation and dynamics of reduced HIV-1 Tat-(1-72) by NMR spectroscopy.
  • Journal: J Biol Chem. 2006 Mar 31;281(13):8347-56. Epub 2006 Jan 19
  • DOI:10.1074/jbc.M510748200
  • Author:Shojania S, O’Neil JD
  • number of AA:72
  • Sequence: from 1-102, I searched from NCBI [gi:114842135]
    MEPVDPNLEPWKHPGSQPPTACSKCYCKKCCWHCQLCFLK
    KGLGISYGRKKRKHRRGTPQSSKDHQNPIPEQPLPIIRGNQT
    GPKEQKKTVASKAERDLCA
  • BMRB code: N/A

HSQC or other spectra

HIV-1 TAT hsqc

[IDP] human gamma synuclein

Filed under: IDP — kpwu @ 12:46 pm
  • Title: Sensitivity of secondary structure propensities to sequence differences between {alpha}- and {gamma}-synuclein: Implications for fibrillation
  • Journal: Protein Science (2006), 15:2795-2804
  • DOI:10.1110/ps.062465306
  • Author:Joseph A. Marsh, Vinay K. Singh, Zongchao Jia, and Julie D. Forman-Kay
  • number of AA:127
  • Sequence:
    MDVFKKGFSIAKEGVVGAVEKTKQGVTEAAEKTKEGVMYV
    GAKTKENVVQSVTSVAEKTKEQANAVSEAVVSSVNTVATK
    TVEEAENIAVTSGVVRKEDLRPSAPQQEGEASKEKEEVAE
    EAQSGGD
  • BMRB code: 7244

HSQC or other spectra

gS (from Supp. material) or HSQC:
gS

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